Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
RTRAFQ9CQE8 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
RTRAFQ9CQE8 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
RTRAFQ9CQE8 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
RTRAFQ9CQE8 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
RTRAFQ9CQE8 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
RTRAFQ9CQE8 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
RTRAFQ9CQE8 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
RTRAFQ9CQE8 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
RTRAFQ9CQE8 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
RTRAFQ9CQE8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.87
RTRAFQ9CQE8 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
RTRAFQ9CQE8 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
RTRAFQ9CQE8 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm11618-201ENSMUST00000117946 267 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm15429-201ENSMUST00000151268 798 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm26185-201ENSMUST00000157692 266 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm17208-201ENSMUST00000168388 535 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm9022-201ENSMUST00000182482 992 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Mir7684-201ENSMUST00000183858 60 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm42929-201ENSMUST00000198374 1286 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm45195-201ENSMUST00000205597 1008 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Cdk7-205ENSMUST00000225990 1159 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 n-R5s77-201ENSMUST00000083757 119 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Gm8420-201ENSMUST00000097103 598 ntBASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
RTRAFQ9CQE8 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Pcdh15-207ENSMUST00000124046 5336 ntTSL 5 BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
RTRAFQ9CQE8 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms