Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Rpa3Q9CQ71 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Gm45433-201ENSMUST00000209386 247 ntBASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rpa3Q9CQ71 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
Rpa3Q9CQ71 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.58□□□□□ -0.39
Rpa3Q9CQ71 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rpa3Q9CQ71 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Rpa3Q9CQ71 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.58□□□□□ -0.39
Rpa3Q9CQ71 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Rpa3Q9CQ71 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.58□□□□□ -0.39
Rpa3Q9CQ71 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Gm5616-201ENSMUST00000165252 384 ntBASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Gm8741-201ENSMUST00000174736 384 ntBASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Gm17827-201ENSMUST00000211825 742 ntBASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.58□□□□□ -0.4
Rpa3Q9CQ71 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.57□□□□□ -0.4
Rpa3Q9CQ71 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa3Q9CQ71 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.57□□□□□ -0.4
Rpa3Q9CQ71 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa3Q9CQ71 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa3Q9CQ71 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa3Q9CQ71 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.57□□□□□ -0.4
Rpa3Q9CQ71 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa3Q9CQ71 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Rpa3Q9CQ71 Gm26286-201ENSMUST00000104166 134 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms