Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Gm26232-201ENSMUST00000083360 166 ntBASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.27□□□□□ -0.61
Ska1Q9CPV1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ska1Q9CPV1 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Mir1247-201ENSMUST00000116706 82 ntBASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Gm13829-201ENSMUST00000119600 138 ntBASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Gm6222-202ENSMUST00000182143 629 ntBASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Gm5745-201ENSMUST00000183748 313 ntBASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Gm10076-201ENSMUST00000073238 384 ntBASIC11.26□□□□□ -0.61
Ska1Q9CPV1 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ska1Q9CPV1 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Gm13736-201ENSMUST00000119272 253 ntBASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.25□□□□□ -0.61
Ska1Q9CPV1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms