Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Gm42427-201ENSMUST00000200473 5292 ntBASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Gm13736-201ENSMUST00000119272 253 ntBASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Gm13342-201ENSMUST00000121055 207 ntBASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Gm6244-201ENSMUST00000178732 841 ntBASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Gm8602-201ENSMUST00000184045 607 ntBASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Gm18187-201ENSMUST00000196476 984 ntBASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Gm18711-201ENSMUST00000199341 750 ntBASIC10.72□□□□□ -0.69
Krt88Q9CPR6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Krt88Q9CPR6 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Gm9431-201ENSMUST00000119765 1051 ntBASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Gm24644-201ENSMUST00000157114 139 ntBASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Gm26927-201ENSMUST00000182385 965 ntBASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Gm18584-201ENSMUST00000203098 964 ntBASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.71□□□□□ -0.69
Krt88Q9CPR6 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Gm39404-201ENSMUST00000216350 313 ntBASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Krt88Q9CPR6 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Krt88Q9CPR6 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Krt88Q9CPR6 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Krt88Q9CPR6 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Krt88Q9CPR6 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Krt88Q9CPR6 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Krt88Q9CPR6 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Krt88Q9CPR6 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Krt88Q9CPR6 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms