Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Mir339-201ENSMUST00000083659 96 ntBASIC12.96□□□□□ -0.33
Gtf2a1Q99PM3 Gm44445-201ENSMUST00000204075 2683 ntBASIC12.96□□□□□ -0.33
Gtf2a1Q99PM3 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.96□□□□□ -0.33
Gtf2a1Q99PM3 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2a1Q99PM3 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Gtf2a1Q99PM3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.96□□□□□ -0.33
Gtf2a1Q99PM3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.96□□□□□ -0.33
Gtf2a1Q99PM3 Cpt1b-201ENSMUST00000109313 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gtf2a1Q99PM3 Gm19409-201ENSMUST00000198244 2858 ntBASIC12.96□□□□□ -0.34
Gtf2a1Q99PM3 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gtf2a1Q99PM3 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gtf2a1Q99PM3 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Gtf2a1Q99PM3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Srprb-201ENSMUST00000035157 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Platr9-202ENSMUST00000149572 1556 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Traf7-215ENSMUST00000176652 3003 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Gm24231-201ENSMUST00000104315 133 ntBASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Gm27301-201ENSMUST00000184012 127 ntBASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Gm27631-201ENSMUST00000184163 466 ntBASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Sfi1-218ENSMUST00000153425 3759 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Gm15903-202ENSMUST00000199631 3518 ntBASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Npas4-201ENSMUST00000056129 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Txk-206ENSMUST00000198464 2271 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Gm43820-201ENSMUST00000199414 3346 ntBASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC12.95□□□□□ -0.34
Gtf2a1Q99PM3 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Gm42979-201ENSMUST00000196287 2228 ntBASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Gm4454-201ENSMUST00000190585 2578 ntBASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Actn2-203ENSMUST00000168193 2920 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Cptp-201ENSMUST00000030950 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Gm6447-201ENSMUST00000118905 835 ntBASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Gm11452-201ENSMUST00000122376 690 ntBASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Gm21470-201ENSMUST00000187680 696 ntBASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Zfp423-203ENSMUST00000165770 4334 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Iqgap3-204ENSMUST00000194440 3263 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Sun1-204ENSMUST00000110882 2454 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Gtf2a1Q99PM3 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms