Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim8Q99PJ2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Gm24934-201ENSMUST00000103764 111 ntBASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trim8Q99PJ2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Gm13316-201ENSMUST00000140537 691 ntBASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Gm13570-201ENSMUST00000140763 309 ntBASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Gm17420-201ENSMUST00000164753 153 ntBASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trim8Q99PJ2 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms