Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 BC043934-202ENSMUST00000185694 2356 ntBASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.57□□□□□ -0.56
Rnf111Q99ML9 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rnf111Q99ML9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Gm28882-201ENSMUST00000185504 314 ntBASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.56□□□□□ -0.56
Rnf111Q99ML9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Gm6621-201ENSMUST00000193251 772 ntBASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.56□□□□□ -0.56
Rnf111Q99ML9 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Dhrs4-202ENSMUST00000226168 828 ntBASIC11.56□□□□□ -0.56
Rnf111Q99ML9 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.56□□□□□ -0.56
Rnf111Q99ML9 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.56□□□□□ -0.56
Rnf111Q99ML9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Gm30285-201ENSMUST00000214614 422 ntBASIC11.55□□□□□ -0.56
Rnf111Q99ML9 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.55□□□□□ -0.56
Rnf111Q99ML9 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Rnf111Q99ML9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms