Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Gm14832-201ENSMUST00000121289 322 ntBASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Mir8109-201ENSMUST00000184375 117 ntBASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Chmp1b1Q99LU0 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chmp1b1Q99LU0 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chmp1b1Q99LU0 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chmp1b1Q99LU0 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC11.27□□□□□ -0.6
Chmp1b1Q99LU0 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Chmp1b1Q99LU0 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chmp1b1Q99LU0 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Chmp1b1Q99LU0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.27□□□□□ -0.6
Chmp1b1Q99LU0 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Chmp1b1Q99LU0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Gm23912-201ENSMUST00000104687 87 ntBASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Gm20482-202ENSMUST00000174729 825 ntBASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Gm43758-201ENSMUST00000199500 367 ntBASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.27□□□□□ -0.61
Chmp1b1Q99LU0 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms