Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm29127-201ENSMUST00000188304 517 ntBASIC12□□□□□ -0.49
Cdk9Q99J95 Gm18304-201ENSMUST00000189162 546 ntBASIC12□□□□□ -0.49
Cdk9Q99J95 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12□□□□□ -0.49
Cdk9Q99J95 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12□□□□□ -0.49
Cdk9Q99J95 AC069562.3-201ENSMUST00000225387 587 ntBASIC12□□□□□ -0.49
Cdk9Q99J95 Gm8420-201ENSMUST00000097103 598 ntBASIC12□□□□□ -0.49
Cdk9Q99J95 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12□□□□□ -0.49
Cdk9Q99J95 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12□□□□□ -0.49
Cdk9Q99J95 Gm38194-201ENSMUST00000194529 2211 ntBASIC12□□□□□ -0.49
Cdk9Q99J95 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12□□□□□ -0.49
Cdk9Q99J95 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
Cdk9Q99J95 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cdk9Q99J95 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12□□□□□ -0.49
Cdk9Q99J95 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cdk9Q99J95 Gm13135-201ENSMUST00000117628 3121 ntBASIC12□□□□□ -0.49
Cdk9Q99J95 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cdk9Q99J95 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Gm9083-201ENSMUST00000120423 819 ntBASIC11.99□□□□□ -0.49
Cdk9Q99J95 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdk9Q99J95 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Gm29705-201ENSMUST00000212598 474 ntBASIC11.99□□□□□ -0.49
Cdk9Q99J95 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.99□□□□□ -0.49
Cdk9Q99J95 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.99□□□□□ -0.49
Cdk9Q99J95 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdk9Q99J95 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Gm37368-201ENSMUST00000193173 3212 ntBASIC11.98□□□□□ -0.49
Cdk9Q99J95 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.98□□□□□ -0.49
Cdk9Q99J95 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.98□□□□□ -0.49
Cdk9Q99J95 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Gm13226-201ENSMUST00000117838 404 ntBASIC11.98□□□□□ -0.49
Cdk9Q99J95 Gm11439-201ENSMUST00000118598 409 ntBASIC11.98□□□□□ -0.49
Cdk9Q99J95 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Gm23119-201ENSMUST00000158610 140 ntBASIC11.98□□□□□ -0.49
Cdk9Q99J95 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Gm45784-201ENSMUST00000188360 142 ntBASIC11.98□□□□□ -0.49
Cdk9Q99J95 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdk9Q99J95 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.98□□□□□ -0.49
Cdk9Q99J95 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.98□□□□□ -0.49
Cdk9Q99J95 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.98□□□□□ -0.49
Cdk9Q99J95 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms