Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Gm37905-201ENSMUST00000195310 341 ntBASIC13.8□□□□□ -0.2
Smc1bQ920F6 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.8□□□□□ -0.2
Smc1bQ920F6 Gm9463-201ENSMUST00000206707 601 ntBASIC13.8□□□□□ -0.2
Smc1bQ920F6 Gm9132-201ENSMUST00000210182 832 ntBASIC13.8□□□□□ -0.2
Smc1bQ920F6 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.8□□□□□ -0.2
Smc1bQ920F6 Gm18974-201ENSMUST00000221478 1031 ntBASIC13.8□□□□□ -0.2
Smc1bQ920F6 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.8□□□□□ -0.2
Smc1bQ920F6 AC157950.1-201ENSMUST00000217561 2168 ntBASIC13.8□□□□□ -0.2
Smc1bQ920F6 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.8□□□□□ -0.2
Smc1bQ920F6 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Smc1bQ920F6 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC13.79□□□□□ -0.2
Smc1bQ920F6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Rmrp-201ENSMUST00000157463 271 ntBASIC13.79□□□□□ -0.2
Smc1bQ920F6 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Gm23153-201ENSMUST00000175323 313 ntBASIC13.79□□□□□ -0.2
Smc1bQ920F6 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Gm43962-201ENSMUST00000203898 190 ntBASIC13.79□□□□□ -0.2
Smc1bQ920F6 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.79□□□□□ -0.2
Smc1bQ920F6 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.79□□□□□ -0.2
Smc1bQ920F6 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.79□□□□□ -0.2
Smc1bQ920F6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.79□□□□□ -0.2
Smc1bQ920F6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smc1bQ920F6 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.78□□□□□ -0.2
Smc1bQ920F6 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1bQ920F6 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Gm25880-201ENSMUST00000104331 132 ntBASIC13.78□□□□□ -0.2
Smc1bQ920F6 Gm13047-201ENSMUST00000117116 815 ntBASIC13.78□□□□□ -0.2
Smc1bQ920F6 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.78□□□□□ -0.2
Smc1bQ920F6 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Gm25072-201ENSMUST00000175233 235 ntBASIC13.78□□□□□ -0.2
Smc1bQ920F6 Gm8492-201ENSMUST00000182375 987 ntBASIC13.78□□□□□ -0.2
Smc1bQ920F6 Gm5733-201ENSMUST00000190232 939 ntBASIC13.78□□□□□ -0.2
Smc1bQ920F6 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC13.78□□□□□ -0.2
Smc1bQ920F6 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.78□□□□□ -0.2
Smc1bQ920F6 Mir219a-1-201ENSMUST00000083621 110 ntBASIC13.78□□□□□ -0.2
Smc1bQ920F6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smc1bQ920F6 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms