Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Gm8385-201ENSMUST00000058999 643 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdha3Q91Y16 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Gm14277-201ENSMUST00000121195 360 ntBASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Gm5706-201ENSMUST00000181525 993 ntBASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.48□□□□□ -0.41
Pcdha3Q91Y16 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Gm12997-201ENSMUST00000120207 640 ntBASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdha3Q91Y16 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Pcdha3Q91Y16 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 664.7 ms