Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhb20Q91XZ9 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm43158-201ENSMUST00000198484 1555 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 4930408K08Rik-201ENSMUST00000195936 1436 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 AC117608.2-201ENSMUST00000224124 1363 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm13806-201ENSMUST00000117822 325 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm26968-201ENSMUST00000182894 481 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm27468-201ENSMUST00000183577 106 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm37317-201ENSMUST00000192198 1024 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm44364-201ENSMUST00000198368 141 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm43822-201ENSMUST00000200285 476 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm18988-201ENSMUST00000205601 746 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 AL929265.1-201ENSMUST00000213427 125 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 AC157017.2-201ENSMUST00000218354 777 ntBASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhb20Q91XZ9 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Gm43168-201ENSMUST00000201039 1612 ntBASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Daam2-202ENSMUST00000224595 1926 ntBASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pcdhb20Q91XZ9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms