Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Gm37469-201ENSMUST00000193728 890 ntBASIC12.41□□□□□ -0.42
Usp3Q91W36 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.41□□□□□ -0.42
Usp3Q91W36 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Gm20177-201ENSMUST00000203705 334 ntBASIC12.41□□□□□ -0.42
Usp3Q91W36 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Gm4157-201ENSMUST00000211647 679 ntBASIC12.41□□□□□ -0.42
Usp3Q91W36 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.41□□□□□ -0.42
Usp3Q91W36 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp3Q91W36 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Usp3Q91W36 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.4□□□□□ -0.42
Usp3Q91W36 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Usp3Q91W36 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Usp3Q91W36 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Usp3Q91W36 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Usp3Q91W36 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.4□□□□□ -0.42
Usp3Q91W36 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.4□□□□□ -0.42
Usp3Q91W36 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.4□□□□□ -0.42
Usp3Q91W36 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.4□□□□□ -0.42
Usp3Q91W36 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.4□□□□□ -0.42
Usp3Q91W36 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.4□□□□□ -0.42
Usp3Q91W36 Gm26461-201ENSMUST00000175064 290 ntBASIC12.4□□□□□ -0.42
Usp3Q91W36 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Usp3Q91W36 Gm43184-201ENSMUST00000197247 542 ntBASIC12.4□□□□□ -0.42
Usp3Q91W36 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 AC117797.1-201ENSMUST00000223977 695 ntBASIC12.4□□□□□ -0.42
Usp3Q91W36 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Usp3Q91W36 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Gm26448-201ENSMUST00000082446 203 ntBASIC12.4□□□□□ -0.42
Usp3Q91W36 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Usp3Q91W36 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC12.4□□□□□ -0.42
Usp3Q91W36 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Usp3Q91W36 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.4□□□□□ -0.43
Usp3Q91W36 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Usp3Q91W36 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Usp3Q91W36 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Usp3Q91W36 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC12.39□□□□□ -0.43
Usp3Q91W36 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Usp3Q91W36 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp3Q91W36 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Usp3Q91W36 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Gm23596-201ENSMUST00000104304 132 ntBASIC12.39□□□□□ -0.43
Usp3Q91W36 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Usp3Q91W36 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Usp3Q91W36 Gm11509-201ENSMUST00000117358 325 ntBASIC12.39□□□□□ -0.43
Usp3Q91W36 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Usp3Q91W36 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Usp3Q91W36 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Gm3332-201ENSMUST00000189337 928 ntBASIC12.39□□□□□ -0.43
Usp3Q91W36 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.39□□□□□ -0.43
Usp3Q91W36 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 Gm42464-201ENSMUST00000196717 417 ntBASIC12.39□□□□□ -0.43
Usp3Q91W36 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Usp3Q91W36 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms