Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx41Q91VN6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx41Q91VN6 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx41Q91VN6 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx41Q91VN6 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Ddx41Q91VN6 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ddx41Q91VN6 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Gm45532-201ENSMUST00000210342 3620 ntBASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Gm22133-201ENSMUST00000102082 109 ntBASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Gm43962-201ENSMUST00000203898 190 ntBASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Gm44100-201ENSMUST00000204329 436 ntBASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Gm8959-201ENSMUST00000213150 571 ntBASIC13.7□□□□□ -0.22
Ddx41Q91VN6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Gm45496-201ENSMUST00000209918 2917 ntBASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ddx41Q91VN6 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.69□□□□□ -0.22
Ddx41Q91VN6 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Gm43860-201ENSMUST00000201742 2705 ntBASIC13.69□□□□□ -0.22
Ddx41Q91VN6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ddx41Q91VN6 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 AC126257.2-201ENSMUST00000215507 2300 ntBASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Gm14263-201ENSMUST00000117955 746 ntBASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Gm23699-201ENSMUST00000158835 135 ntBASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms