Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Gm4864-201ENSMUST00000219894 1461 ntBASIC12.3□□□□□ -0.44
Trim60Q8VI40 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.3□□□□□ -0.44
Trim60Q8VI40 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Gm11700-201ENSMUST00000119409 403 ntBASIC12.3□□□□□ -0.44
Trim60Q8VI40 Gm4986-201ENSMUST00000119731 549 ntBASIC12.3□□□□□ -0.44
Trim60Q8VI40 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Gm43118-201ENSMUST00000199149 775 ntBASIC12.3□□□□□ -0.44
Trim60Q8VI40 Gm5950-201ENSMUST00000213337 772 ntBASIC12.3□□□□□ -0.44
Trim60Q8VI40 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Gm8420-201ENSMUST00000097103 598 ntBASIC12.3□□□□□ -0.44
Trim60Q8VI40 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim60Q8VI40 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.29□□□□□ -0.44
Trim60Q8VI40 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim60Q8VI40 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.29□□□□□ -0.44
Trim60Q8VI40 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Gm42627-201ENSMUST00000197347 224 ntBASIC12.29□□□□□ -0.44
Trim60Q8VI40 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim60Q8VI40 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.29□□□□□ -0.44
Trim60Q8VI40 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.29□□□□□ -0.44
Trim60Q8VI40 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.29□□□□□ -0.44
Trim60Q8VI40 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.29□□□□□ -0.44
Trim60Q8VI40 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim60Q8VI40 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim60Q8VI40 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms