Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Pcdh18Q8VHR0 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Pcdh18Q8VHR0 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Gm24231-201ENSMUST00000104315 133 ntBASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Gm8602-201ENSMUST00000184045 607 ntBASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Gm29127-201ENSMUST00000188304 517 ntBASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Gm43433-201ENSMUST00000196573 481 ntBASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh18Q8VHR0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Gm14127-201ENSMUST00000117906 678 ntBASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Gm12384-201ENSMUST00000119228 919 ntBASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Gm27682-201ENSMUST00000183930 110 ntBASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Gm5904-201ENSMUST00000210286 865 ntBASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Gm40466-201ENSMUST00000212174 422 ntBASIC11.51□□□□□ -0.57
Pcdh18Q8VHR0 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms