Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 AC159103.1-201ENSMUST00000228325 429 ntBASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ddx39aQ8VDW0 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Ddx39aQ8VDW0 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx39aQ8VDW0 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx39aQ8VDW0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx39aQ8VDW0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx39aQ8VDW0 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx39aQ8VDW0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.21□□□□□ -0.3
Ddx39aQ8VDW0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ddx39aQ8VDW0 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Gm7666-201ENSMUST00000146631 819 ntBASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Gm29499-201ENSMUST00000189151 486 ntBASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Gm28329-201ENSMUST00000191208 689 ntBASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Gm29171-201ENSMUST00000191397 486 ntBASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Gm17831-201ENSMUST00000205579 900 ntBASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 AC166344.1-201ENSMUST00000223745 674 ntBASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ddx39aQ8VDW0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ddx39aQ8VDW0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms