Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf8Q8VC56 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf8Q8VC56 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Rnf8Q8VC56 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Rnf8Q8VC56 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf8Q8VC56 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf8Q8VC56 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.53□□□□□ -0.56
Rnf8Q8VC56 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.53□□□□□ -0.56
Rnf8Q8VC56 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.53□□□□□ -0.56
Rnf8Q8VC56 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf8Q8VC56 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf8Q8VC56 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Rnf8Q8VC56 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Rnf8Q8VC56 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf8Q8VC56 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf8Q8VC56 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Rnf8Q8VC56 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf8Q8VC56 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Rnf8Q8VC56 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Gm14381-201ENSMUST00000122105 414 ntBASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Gm2991-201ENSMUST00000173338 480 ntBASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Gm2546-201ENSMUST00000182630 991 ntBASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Gm27243-201ENSMUST00000183964 521 ntBASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Gm38341-201ENSMUST00000195357 515 ntBASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Gm7783-201ENSMUST00000204795 781 ntBASIC11.52□□□□□ -0.57
Rnf8Q8VC56 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Rnf8Q8VC56 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Gm9361-201ENSMUST00000198695 1507 ntBASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Gm27516-201ENSMUST00000184237 98 ntBASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Gm19963-201ENSMUST00000208413 1255 ntBASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Gm45865-201ENSMUST00000211815 945 ntBASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Gm39404-201ENSMUST00000216350 313 ntBASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Cts7-204ENSMUST00000225321 1257 ntBASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Olfr582-201ENSMUST00000098212 960 ntBASIC11.51□□□□□ -0.57
Rnf8Q8VC56 BC043934-202ENSMUST00000185694 2356 ntBASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Rnf8Q8VC56 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms