Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Syt15-201ENSMUST00000035351 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Gm9797-201ENSMUST00000052902 613 ntBASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Gm10699-201ENSMUST00000098916 2130 ntBASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Gm43372-201ENSMUST00000202662 3016 ntBASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc9Q8VC31 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Kalrn-203ENSMUST00000114947 2922 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc9Q8VC31 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Wars-205ENSMUST00000161410 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Gm22189-201ENSMUST00000103822 86 ntBASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Gm16372-201ENSMUST00000073088 450 ntBASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc9Q8VC31 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms