Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Gm10478-201ENSMUST00000084451 396 ntBASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Vps39Q8R5L3 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Gm31256-201ENSMUST00000194705 506 ntBASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Vps39Q8R5L3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Gm14726-201ENSMUST00000120623 896 ntBASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Gm12164-201ENSMUST00000121695 551 ntBASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Vps39Q8R5L3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms