Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp7Q8R1T1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Gm8459-201ENSMUST00000162504 760 ntBASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Gm8342-201ENSMUST00000209839 757 ntBASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 CT025553.1-201ENSMUST00000226292 299 ntBASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 AC099645.1-201ENSMUST00000226476 1105 ntBASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Gm8522-201ENSMUST00000118416 1929 ntBASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Chmp7Q8R1T1 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Gm12419-201ENSMUST00000116649 636 ntBASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Gm13937-201ENSMUST00000121000 988 ntBASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Gm42790-201ENSMUST00000201268 969 ntBASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Gm44315-201ENSMUST00000203041 219 ntBASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Gm44124-201ENSMUST00000204159 472 ntBASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Olfr584-201ENSMUST00000098210 964 ntBASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chmp7Q8R1T1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Gm12856-201ENSMUST00000119471 1293 ntBASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Gm9089-201ENSMUST00000122027 526 ntBASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Gm11434-201ENSMUST00000122379 629 ntBASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Gm6114-201ENSMUST00000182472 968 ntBASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Gm8574-201ENSMUST00000203207 924 ntBASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Gm3793-201ENSMUST00000204973 672 ntBASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Chmp7Q8R1T1 Gm19009-201ENSMUST00000223072 823 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms