Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Gm5186-201ENSMUST00000218781 920 ntBASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Gm9368-201ENSMUST00000219348 831 ntBASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cchcr1Q8K2I2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Rgr-203ENSMUST00000225070 4704 ntBASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Gm11700-201ENSMUST00000119409 403 ntBASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Gm6963-201ENSMUST00000147879 379 ntBASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Gm5070-201ENSMUST00000177599 862 ntBASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Gm6621-201ENSMUST00000193251 772 ntBASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cchcr1Q8K2I2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Gm3836-201ENSMUST00000211377 1613 ntBASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Mir7085-201ENSMUST00000184353 66 ntBASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Gm8956-201ENSMUST00000203939 825 ntBASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Cchcr1Q8K2I2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cchcr1Q8K2I2 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms