Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Gm14644-201ENSMUST00000116671 647 ntBASIC12.2□□□□□ -0.46
CopaQ8CIE6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Gm24749-201ENSMUST00000157838 343 ntBASIC12.2□□□□□ -0.46
CopaQ8CIE6 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.2□□□□□ -0.46
CopaQ8CIE6 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Gm19187-201ENSMUST00000206781 892 ntBASIC12.2□□□□□ -0.46
CopaQ8CIE6 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.2□□□□□ -0.46
CopaQ8CIE6 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Gm12566-201ENSMUST00000121479 359 ntBASIC12.19□□□□□ -0.46
CopaQ8CIE6 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.19□□□□□ -0.46
CopaQ8CIE6 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Gm18304-201ENSMUST00000189162 546 ntBASIC12.19□□□□□ -0.46
CopaQ8CIE6 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.19□□□□□ -0.46
CopaQ8CIE6 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CopaQ8CIE6 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.18□□□□□ -0.46
CopaQ8CIE6 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CopaQ8CIE6 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms