Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clip4Q8CI96 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clip4Q8CI96 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip4Q8CI96 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip4Q8CI96 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clip4Q8CI96 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.02□□□□□ -0.49
Clip4Q8CI96 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Clip4Q8CI96 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip4Q8CI96 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip4Q8CI96 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Clip4Q8CI96 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip4Q8CI96 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip4Q8CI96 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Clip4Q8CI96 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.02□□□□□ -0.49
Clip4Q8CI96 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Clip4Q8CI96 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.02□□□□□ -0.49
Clip4Q8CI96 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Gm42937-201ENSMUST00000197360 752 ntBASIC12.01□□□□□ -0.49
Clip4Q8CI96 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.01□□□□□ -0.49
Clip4Q8CI96 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Clip4Q8CI96 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.01□□□□□ -0.49
Clip4Q8CI96 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Clip4Q8CI96 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12□□□□□ -0.49
Clip4Q8CI96 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Clip4Q8CI96 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12□□□□□ -0.49
Clip4Q8CI96 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Clip4Q8CI96 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12□□□□□ -0.49
Clip4Q8CI96 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Clip4Q8CI96 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12□□□□□ -0.49
Clip4Q8CI96 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12□□□□□ -0.49
Clip4Q8CI96 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12□□□□□ -0.49
Clip4Q8CI96 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12□□□□□ -0.49
Clip4Q8CI96 Gm5869-201ENSMUST00000200248 1257 ntBASIC12□□□□□ -0.49
Clip4Q8CI96 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12□□□□□ -0.49
Clip4Q8CI96 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Clip4Q8CI96 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12□□□□□ -0.49
Clip4Q8CI96 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Gm45342-201ENSMUST00000210903 1363 ntBASIC12□□□□□ -0.49
Clip4Q8CI96 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clip4Q8CI96 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Clip4Q8CI96 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms