Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC14.67□□□□□ -0.06
Smc5Q8CG46 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC14.67□□□□□ -0.06
Smc5Q8CG46 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
Smc5Q8CG46 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
Smc5Q8CG46 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.66□□□□□ -0.06
Smc5Q8CG46 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.66□□□□□ -0.06
Smc5Q8CG46 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Gm15004-201ENSMUST00000119192 630 ntBASIC14.65□□□□□ -0.06
Smc5Q8CG46 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.65□□□□□ -0.06
Smc5Q8CG46 AC153954.1-201ENSMUST00000216959 255 ntBASIC14.65□□□□□ -0.06
Smc5Q8CG46 Gm9823-201ENSMUST00000051212 327 ntBASIC14.65□□□□□ -0.06
Smc5Q8CG46 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.65□□□□□ -0.06
Smc5Q8CG46 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smc5Q8CG46 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Erich3-203ENSMUST00000189969 3460 ntBASIC14.64□□□□□ -0.07
Smc5Q8CG46 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Gm7841-201ENSMUST00000122108 1629 ntBASIC14.64□□□□□ -0.07
Smc5Q8CG46 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smc5Q8CG46 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.64□□□□□ -0.07
Smc5Q8CG46 Gm19287-201ENSMUST00000203190 358 ntBASIC14.64□□□□□ -0.07
Smc5Q8CG46 Gm18054-201ENSMUST00000207539 555 ntBASIC14.64□□□□□ -0.07
Smc5Q8CG46 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms