Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Gm7809-201ENSMUST00000153199 742 ntBASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Mospd4-201ENSMUST00000180618 576 ntBASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Gm3890-201ENSMUST00000182416 207 ntBASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Gm18304-201ENSMUST00000189162 546 ntBASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Gm24526-201ENSMUST00000082921 158 ntBASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Lrif1Q8CDD9 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lrif1Q8CDD9 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Lrif1Q8CDD9 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lrif1Q8CDD9 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lrif1Q8CDD9 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lrif1Q8CDD9 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Lrif1Q8CDD9 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lrif1Q8CDD9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Lrif1Q8CDD9 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Lrif1Q8CDD9 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Gm10434-201ENSMUST00000101158 471 ntBASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Gm13342-201ENSMUST00000121055 207 ntBASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Gm7046-201ENSMUST00000221351 977 ntBASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Lrif1Q8CDD9 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Gm6222-202ENSMUST00000182143 629 ntBASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Gm37489-201ENSMUST00000191883 159 ntBASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lrif1Q8CDD9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms