Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Gm24845-201ENSMUST00000158034 109 ntBASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Gm7467-201ENSMUST00000185173 652 ntBASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Gm28882-201ENSMUST00000185504 314 ntBASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Spcs1-203ENSMUST00000226374 592 ntBASIC13.89□□□□□ -0.19
Vps53Q8CCB4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Gm10702-201ENSMUST00000098929 1268 ntBASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Vps53Q8CCB4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.89□□□□□ -0.19
Vps53Q8CCB4 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Gm9211-201ENSMUST00000182882 975 ntBASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Gm7848-201ENSMUST00000210739 718 ntBASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Vps53Q8CCB4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm18734-201ENSMUST00000172937 808 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm29615-201ENSMUST00000185371 697 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm28224-201ENSMUST00000186078 697 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm29001-201ENSMUST00000186177 697 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm28292-201ENSMUST00000186593 697 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm28101-201ENSMUST00000187608 697 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm29076-201ENSMUST00000187689 697 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm28302-201ENSMUST00000187931 697 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm28646-201ENSMUST00000188220 697 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm28205-201ENSMUST00000189177 697 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm29032-201ENSMUST00000189797 697 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm28695-201ENSMUST00000190300 697 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm37448-201ENSMUST00000192795 697 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 AU022133-201ENSMUST00000200601 873 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm45598-202ENSMUST00000210719 986 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms