Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Gm23912-201ENSMUST00000104687 87 ntBASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Gm11578-201ENSMUST00000118530 459 ntBASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Gm12783-201ENSMUST00000121425 397 ntBASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Col6a6Q8C6K9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Gm20414-201ENSMUST00000172918 646 ntBASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Gm37981-201ENSMUST00000194280 535 ntBASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.73□□□□□ -0.69
Col6a6Q8C6K9 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm23272-201ENSMUST00000104053 129 ntBASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm12948-201ENSMUST00000119406 682 ntBASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm9507-202ENSMUST00000180157 654 ntBASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm5700-201ENSMUST00000191483 989 ntBASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Col6a6Q8C6K9 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms