Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Gm27844-201ENSMUST00000183613 62 ntBASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Gm29199-201ENSMUST00000187766 775 ntBASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 AC133602.1-201ENSMUST00000227510 509 ntBASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nek11Q8C0Q4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nek11Q8C0Q4 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nek11Q8C0Q4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nek11Q8C0Q4 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Nek11Q8C0Q4 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm14724-201ENSMUST00000118400 537 ntBASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm12266-201ENSMUST00000120311 962 ntBASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm25881-201ENSMUST00000157783 103 ntBASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm16505-201ENSMUST00000179981 232 ntBASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm28937-201ENSMUST00000185413 695 ntBASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm29400-201ENSMUST00000187208 695 ntBASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm28662-201ENSMUST00000188446 695 ntBASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm28251-201ENSMUST00000188835 695 ntBASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm37318-201ENSMUST00000194325 695 ntBASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm38017-201ENSMUST00000194768 695 ntBASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm37287-201ENSMUST00000195449 695 ntBASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm37793-201ENSMUST00000195548 695 ntBASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nek11Q8C0Q4 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Gm23200-201ENSMUST00000104379 132 ntBASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nek11Q8C0Q4 Gm28450-201ENSMUST00000187349 638 ntBASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms