Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.24□□□□□ -0.29
Trim47Q8C0E3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Gm23251-201ENSMUST00000103773 110 ntBASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Gm11663-201ENSMUST00000117888 290 ntBASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Gm11331-201ENSMUST00000119764 288 ntBASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Gm43037-201ENSMUST00000196808 250 ntBASIC13.23□□□□□ -0.29
Trim47Q8C0E3 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Gm2965-201ENSMUST00000198365 343 ntBASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Spcs1-203ENSMUST00000226374 592 ntBASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Gm10288-201ENSMUST00000084614 537 ntBASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim47Q8C0E3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Gm8199-201ENSMUST00000121323 823 ntBASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Gm44100-201ENSMUST00000204329 436 ntBASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim47Q8C0E3 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim47Q8C0E3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim47Q8C0E3 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim47Q8C0E3 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim47Q8C0E3 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim47Q8C0E3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim47Q8C0E3 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim47Q8C0E3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim47Q8C0E3 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.21□□□□□ -0.29
Trim47Q8C0E3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trim47Q8C0E3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Trim47Q8C0E3 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim47Q8C0E3 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trim47Q8C0E3 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim47Q8C0E3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim47Q8C0E3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms