Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Gm9540-201ENSMUST00000188230 478 ntBASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Sh3rf2Q8BZT2 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Gm22920-201ENSMUST00000102175 109 ntBASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Gm15352-201ENSMUST00000118696 270 ntBASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Gm44551-201ENSMUST00000208804 171 ntBASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sh3rf2Q8BZT2 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Gm14585-201ENSMUST00000120713 634 ntBASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Gm12208-201ENSMUST00000122004 163 ntBASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Gm6450-201ENSMUST00000200896 574 ntBASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms