Protein–RNA interactions for Protein: Q8BUV6

Lsm11, U7 snRNA-associated Sm-like protein LSm11, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm11Q8BUV6 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm11Q8BUV6 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm11Q8BUV6 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm11Q8BUV6 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Lsm11Q8BUV6 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm11Q8BUV6 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Lsm11Q8BUV6 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm11Q8BUV6 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.34□□□□□ -0.75
Lsm11Q8BUV6 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm11Q8BUV6 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Lsm11Q8BUV6 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lsm11Q8BUV6 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.34□□□□□ -0.75
Lsm11Q8BUV6 Gm43216-201ENSMUST00000196295 1333 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm37234-201ENSMUST00000193259 1441 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm14791-201ENSMUST00000119061 1166 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm14603-201ENSMUST00000121275 448 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm8582-201ENSMUST00000164061 789 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm8641-201ENSMUST00000186995 826 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm18018-201ENSMUST00000198273 408 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm45384-201ENSMUST00000210451 277 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm19269-201ENSMUST00000211401 804 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm4803-201ENSMUST00000218729 1279 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 AC126043.1-201ENSMUST00000221304 1141 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 AC154634.2-201ENSMUST00000225983 1184 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 AC158981.3-201ENSMUST00000226844 1024 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 AC242269.1-201ENSMUST00000227020 741 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Lsm11Q8BUV6 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm11Q8BUV6 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm11Q8BUV6 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm11Q8BUV6 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm11Q8BUV6 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm11Q8BUV6 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm11Q8BUV6 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm11Q8BUV6 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.32□□□□□ -0.76
Lsm11Q8BUV6 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm11Q8BUV6 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm11Q8BUV6 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.32□□□□□ -0.76
Lsm11Q8BUV6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lsm11Q8BUV6 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms