Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Gm13461-201ENSMUST00000120980 662 ntBASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Gm8199-201ENSMUST00000121323 823 ntBASIC12.17□□□□□ -0.46
Nup54Q8BTS4 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Nup54Q8BTS4 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Gm8815-201ENSMUST00000173809 620 ntBASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nup54Q8BTS4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Gm23251-201ENSMUST00000103773 110 ntBASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms