Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Sfr1Q8BP27 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Gm14017-201ENSMUST00000121934 386 ntBASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Gm17812-201ENSMUST00000204935 318 ntBASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Gm44262-201ENSMUST00000204969 372 ntBASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Gm8913-201ENSMUST00000209491 641 ntBASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Zfand2a-201ENSMUST00000079996 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Sfr1Q8BP27 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm7722-201ENSMUST00000120646 741 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm27627-201ENSMUST00000183644 150 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm29615-201ENSMUST00000185371 697 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm28224-201ENSMUST00000186078 697 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm29001-201ENSMUST00000186177 697 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm28292-201ENSMUST00000186593 697 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm28101-201ENSMUST00000187608 697 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm29076-201ENSMUST00000187689 697 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm28302-201ENSMUST00000187931 697 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm28646-201ENSMUST00000188220 697 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm28205-201ENSMUST00000189177 697 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm29032-201ENSMUST00000189797 697 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm28695-201ENSMUST00000190300 697 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm37448-201ENSMUST00000192795 697 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm42599-201ENSMUST00000201308 469 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm45433-201ENSMUST00000209386 247 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms