Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm44323-201ENSMUST00000198689 129 ntBASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Gm43854-201ENSMUST00000200418 394 ntBASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Smok4a-201ENSMUST00000074512 1455 ntBASIC15.35■□□□□ 0.05
Col16a1Q8BLX7 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Gm2594-201ENSMUST00000214774 742 ntBASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Gm9487-201ENSMUST00000216600 472 ntBASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Col16a1Q8BLX7 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Gm11996-201ENSMUST00000117538 915 ntBASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Gm5342-201ENSMUST00000181982 1003 ntBASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Gm37365-201ENSMUST00000193109 409 ntBASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Gm30946-201ENSMUST00000198288 724 ntBASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 AC122891.1-201ENSMUST00000218671 268 ntBASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 CT030135.2-201ENSMUST00000225255 893 ntBASIC15.33■□□□□ 0.05
Col16a1Q8BLX7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col16a1Q8BLX7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Col16a1Q8BLX7 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC15.33■□□□□ 0.04
Col16a1Q8BLX7 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col16a1Q8BLX7 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col16a1Q8BLX7 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col16a1Q8BLX7 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Col16a1Q8BLX7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col16a1Q8BLX7 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col16a1Q8BLX7 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Col16a1Q8BLX7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Col16a1Q8BLX7 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Gm15197-201ENSMUST00000120526 478 ntBASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Gm24954-201ENSMUST00000178831 110 ntBASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Gm5267-201ENSMUST00000191574 1045 ntBASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Gm18035-201ENSMUST00000211962 589 ntBASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Gm6653-201ENSMUST00000218063 1288 ntBASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 AC125108.1-201ENSMUST00000218986 2330 ntBASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Gm27194-201ENSMUST00000175753 2936 ntBASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Gm26368-201ENSMUST00000157826 118 ntBASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Gm6548-201ENSMUST00000167498 1165 ntBASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Gm43249-201ENSMUST00000200464 458 ntBASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms