Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Gm6423-201ENSMUST00000204315 934 ntBASIC16.63■□□□□ 0.25
Usp54Q8BL06 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 AC122035.1-201ENSMUST00000227576 1016 ntBASIC16.63■□□□□ 0.25
Usp54Q8BL06 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Gm6024-201ENSMUST00000117850 1558 ntBASIC16.63■□□□□ 0.25
Usp54Q8BL06 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Usp54Q8BL06 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Gm25830-201ENSMUST00000158923 132 ntBASIC16.62■□□□□ 0.25
Usp54Q8BL06 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC16.62■□□□□ 0.25
Usp54Q8BL06 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Capsl-202ENSMUST00000226688 739 ntBASIC16.62■□□□□ 0.25
Usp54Q8BL06 AC159002.1-201ENSMUST00000226714 924 ntBASIC16.62■□□□□ 0.25
Usp54Q8BL06 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Usp54Q8BL06 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC16.61■□□□□ 0.25
Usp54Q8BL06 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Olfml3-204ENSMUST00000169286 874 ntBASIC16.61■□□□□ 0.25
Usp54Q8BL06 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Usp54Q8BL06 Gm44106-201ENSMUST00000203153 1599 ntBASIC16.61■□□□□ 0.25
Usp54Q8BL06 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Gm15196-201ENSMUST00000121406 482 ntBASIC16.6■□□□□ 0.25
Usp54Q8BL06 Gm12906-201ENSMUST00000154610 441 ntBASIC16.6■□□□□ 0.25
Usp54Q8BL06 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
Usp54Q8BL06 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Usp54Q8BL06 Id2-203ENSMUST00000222667 958 ntBASIC16.6■□□□□ 0.25
Usp54Q8BL06 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms