Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Gm7809-201ENSMUST00000153199 742 ntBASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trim6Q8BGE7 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.64□□□□□ -0.39
Trim6Q8BGE7 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Gm3890-201ENSMUST00000182416 207 ntBASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.64□□□□□ -0.39
Trim6Q8BGE7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Gm40466-201ENSMUST00000212174 422 ntBASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Gm6991-201ENSMUST00000218475 1178 ntBASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trim6Q8BGE7 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Gm24934-201ENSMUST00000103764 111 ntBASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms