Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim50Q810I2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim50Q810I2 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim50Q810I2 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trim50Q810I2 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim50Q810I2 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.6□□□□□ -0.55
Trim50Q810I2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim50Q810I2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trim50Q810I2 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Trim50Q810I2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trim50Q810I2 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim50Q810I2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim50Q810I2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.6□□□□□ -0.55
Trim50Q810I2 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.6□□□□□ -0.55
Trim50Q810I2 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.6□□□□□ -0.55
Trim50Q810I2 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.6□□□□□ -0.55
Trim50Q810I2 Gm8913-201ENSMUST00000209491 641 ntBASIC11.6□□□□□ -0.55
Trim50Q810I2 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.6□□□□□ -0.55
Trim50Q810I2 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.6□□□□□ -0.55
Trim50Q810I2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.6□□□□□ -0.55
Trim50Q810I2 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.6□□□□□ -0.55
Trim50Q810I2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim50Q810I2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.6□□□□□ -0.55
Trim50Q810I2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim50Q810I2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim50Q810I2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.59□□□□□ -0.55
Trim50Q810I2 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim50Q810I2 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim50Q810I2 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Mir877-201ENSMUST00000104738 85 ntBASIC11.59□□□□□ -0.55
Trim50Q810I2 Gm11511-201ENSMUST00000118146 540 ntBASIC11.59□□□□□ -0.55
Trim50Q810I2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.59□□□□□ -0.55
Trim50Q810I2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Gm17812-201ENSMUST00000204935 318 ntBASIC11.59□□□□□ -0.55
Trim50Q810I2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.59□□□□□ -0.55
Trim50Q810I2 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.59□□□□□ -0.55
Trim50Q810I2 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.59□□□□□ -0.55
Trim50Q810I2 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trim50Q810I2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trim50Q810I2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Trim50Q810I2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim50Q810I2 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Trim50Q810I2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trim50Q810I2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms