Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Gm12419-201ENSMUST00000116649 636 ntBASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Gm6407-201ENSMUST00000176468 549 ntBASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Gm38151-201ENSMUST00000195085 289 ntBASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Gm19166-201ENSMUST00000196041 1063 ntBASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Gm6450-201ENSMUST00000200896 574 ntBASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Gm6108-201ENSMUST00000208365 367 ntBASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Usp6nlQ80XC3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Gm17877-201ENSMUST00000192578 814 ntBASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Gm43852-201ENSMUST00000202098 917 ntBASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Gm45113-201ENSMUST00000207518 165 ntBASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Gm19091-201ENSMUST00000208120 978 ntBASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Usp6nlQ80XC3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Usp6nlQ80XC3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Usp6nlQ80XC3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Usp6nlQ80XC3 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Usp6nlQ80XC3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Usp6nlQ80XC3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.14□□□□□ -0.31
Usp6nlQ80XC3 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Usp6nlQ80XC3 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Usp6nlQ80XC3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Usp6nlQ80XC3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Usp6nlQ80XC3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Usp6nlQ80XC3 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Usp6nlQ80XC3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Usp6nlQ80XC3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Usp6nlQ80XC3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms