Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc116Q80X53 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc116Q80X53 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc116Q80X53 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc116Q80X53 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc116Q80X53 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc116Q80X53 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Ccdc116Q80X53 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Ccdc116Q80X53 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Gm9192-201ENSMUST00000183221 985 ntBASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Gm43630-201ENSMUST00000201550 776 ntBASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Gm4607-201ENSMUST00000206649 577 ntBASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Gm19187-201ENSMUST00000206781 892 ntBASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.68□□□□□ -0.54
Ccdc116Q80X53 CT010431.1-201ENSMUST00000221249 1080 ntBASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Gm37785-201ENSMUST00000195783 2408 ntBASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Ccdc116Q80X53 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Gm27046-201ENSMUST00000182160 463 ntBASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Gm45574-201ENSMUST00000210921 331 ntBASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Gm43221-201ENSMUST00000197612 2071 ntBASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ccdc116Q80X53 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms