Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh19Q80TF3 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Gm13045-201ENSMUST00000119019 712 ntBASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Gm15004-201ENSMUST00000119192 630 ntBASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Gm13461-201ENSMUST00000120980 662 ntBASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Gm8199-201ENSMUST00000121323 823 ntBASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Mir1943-201ENSMUST00000158276 73 ntBASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Gm8815-201ENSMUST00000173809 620 ntBASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Gm9555-201ENSMUST00000200908 583 ntBASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh19Q80TF3 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh19Q80TF3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh19Q80TF3 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh19Q80TF3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh19Q80TF3 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh19Q80TF3 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh19Q80TF3 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh19Q80TF3 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh19Q80TF3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh19Q80TF3 Gm6189-201ENSMUST00000164487 2082 ntBASIC11.71□□□□□ -0.54
Pcdh19Q80TF3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Pcdh19Q80TF3 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.71□□□□□ -0.54
Pcdh19Q80TF3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Gm13809-201ENSMUST00000117921 597 ntBASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Gm15207-201ENSMUST00000119259 442 ntBASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms