Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm8343-201ENSMUST00000182705 994 ntBASIC11.12□□□□□ -0.63
Pif1Q80SX8 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.12□□□□□ -0.63
Pif1Q80SX8 Gm4607-201ENSMUST00000206649 577 ntBASIC11.12□□□□□ -0.63
Pif1Q80SX8 Gm8285-201ENSMUST00000208293 759 ntBASIC11.12□□□□□ -0.63
Pif1Q80SX8 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.12□□□□□ -0.63
Pif1Q80SX8 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Pif1Q80SX8 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.11□□□□□ -0.63
Pif1Q80SX8 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Gm11893-201ENSMUST00000117829 491 ntBASIC11.11□□□□□ -0.63
Pif1Q80SX8 Gm14724-201ENSMUST00000118400 537 ntBASIC11.11□□□□□ -0.63
Pif1Q80SX8 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Mir6546-201ENSMUST00000184460 62 ntBASIC11.11□□□□□ -0.63
Pif1Q80SX8 Gm28975-201ENSMUST00000186412 686 ntBASIC11.11□□□□□ -0.63
Pif1Q80SX8 Gm10774-201ENSMUST00000188689 204 ntBASIC11.11□□□□□ -0.63
Pif1Q80SX8 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.11□□□□□ -0.63
Pif1Q80SX8 Gm2965-201ENSMUST00000198365 343 ntBASIC11.11□□□□□ -0.63
Pif1Q80SX8 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.11□□□□□ -0.63
Pif1Q80SX8 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Gm45394-201ENSMUST00000209240 1175 ntBASIC11.11□□□□□ -0.63
Pif1Q80SX8 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.11□□□□□ -0.63
Pif1Q80SX8 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.11□□□□□ -0.63
Pif1Q80SX8 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Pif1Q80SX8 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms