Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.09□□□□□ -0.47
Casc4Q6P2L7 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Casc4Q6P2L7 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Casc4Q6P2L7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Casc4Q6P2L7 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Casc4Q6P2L7 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Gm13996-201ENSMUST00000118456 430 ntBASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Mir433-201ENSMUST00000093564 124 ntBASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Casc4Q6P2L7 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.07□□□□□ -0.48
Casc4Q6P2L7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Gm12164-201ENSMUST00000121695 551 ntBASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.07□□□□□ -0.48
Casc4Q6P2L7 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Gm45433-201ENSMUST00000209386 247 ntBASIC12.07□□□□□ -0.48
Casc4Q6P2L7 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.07□□□□□ -0.48
Casc4Q6P2L7 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Gm8385-201ENSMUST00000058999 643 ntBASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Casc4Q6P2L7 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Casc4Q6P2L7 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Casc4Q6P2L7 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Casc4Q6P2L7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Casc4Q6P2L7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms