Protein–RNA interactions for Protein: Q6DIC0

Smarca2, Probable global transcription activator SNF2L2, mousemouse

Predictions only

Length 1,577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca2Q6DIC0 n-R5s71-201ENSMUST00000093668 119 ntBASIC20.34■□□□□ 0.85
Smarca2Q6DIC0 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC20.34■□□□□ 0.85
Smarca2Q6DIC0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarca2Q6DIC0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smarca2Q6DIC0 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Smarca2Q6DIC0 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC20.33■□□□□ 0.85
Smarca2Q6DIC0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarca2Q6DIC0 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarca2Q6DIC0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarca2Q6DIC0 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smarca2Q6DIC0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarca2Q6DIC0 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Smarca2Q6DIC0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarca2Q6DIC0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarca2Q6DIC0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smarca2Q6DIC0 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 AC107763.1-201ENSMUST00000226082 1365 ntBASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 Gm29164-201ENSMUST00000185454 1024 ntBASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 Gm20781-201ENSMUST00000193154 693 ntBASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 Gm21736-201ENSMUST00000195399 693 ntBASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 CT010480.2-201ENSMUST00000225424 737 ntBASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smarca2Q6DIC0 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Gm19013-201ENSMUST00000183895 1222 ntBASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Gm19014-201ENSMUST00000184828 1189 ntBASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Gm8255-201ENSMUST00000218693 305 ntBASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Gm9102-201ENSMUST00000219250 465 ntBASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 CT025603.1-201ENSMUST00000224040 448 ntBASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Gm15519-201ENSMUST00000120088 1566 ntBASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Smarca2Q6DIC0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Gm15625-201ENSMUST00000117617 1093 ntBASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Gm17221-201ENSMUST00000163909 481 ntBASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Gm17073-201ENSMUST00000168069 556 ntBASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 AC122024.3-201ENSMUST00000217719 294 ntBASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Gm5178-201ENSMUST00000219380 898 ntBASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smarca2Q6DIC0 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Gm22937-201ENSMUST00000103954 131 ntBASIC20.3■□□□□ 0.84
Smarca2Q6DIC0 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms