Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Ctr9Q62018 Gm9062-201ENSMUST00000117712 727 ntBASIC14.07□□□□□ -0.16
Ctr9Q62018 Gm8199-201ENSMUST00000121323 823 ntBASIC14.07□□□□□ -0.16
Ctr9Q62018 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.07□□□□□ -0.16
Ctr9Q62018 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.07□□□□□ -0.16
Ctr9Q62018 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.07□□□□□ -0.16
Ctr9Q62018 Gm4310-201ENSMUST00000177847 889 ntBASIC14.07□□□□□ -0.16
Ctr9Q62018 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ctr9Q62018 Gm19353-201ENSMUST00000184561 445 ntBASIC14.07□□□□□ -0.16
Ctr9Q62018 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Gm2965-201ENSMUST00000198365 343 ntBASIC14.07□□□□□ -0.16
Ctr9Q62018 Gm3786-201ENSMUST00000202659 378 ntBASIC14.07□□□□□ -0.16
Ctr9Q62018 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.07□□□□□ -0.16
Ctr9Q62018 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.07□□□□□ -0.16
Ctr9Q62018 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ctr9Q62018 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.07□□□□□ -0.16
Ctr9Q62018 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.07□□□□□ -0.16
Ctr9Q62018 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ctr9Q62018 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
Ctr9Q62018 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Ctr9Q62018 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ctr9Q62018 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Ctr9Q62018 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
Ctr9Q62018 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Gm12165-201ENSMUST00000117047 342 ntBASIC14.06□□□□□ -0.16
Ctr9Q62018 Gm23085-201ENSMUST00000157849 293 ntBASIC14.06□□□□□ -0.16
Ctr9Q62018 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ctr9Q62018 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.06□□□□□ -0.16
Ctr9Q62018 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ctr9Q62018 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ctr9Q62018 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ctr9Q62018 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Ctr9Q62018 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ctr9Q62018 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ctr9Q62018 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Ctr9Q62018 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.05□□□□□ -0.16
Ctr9Q62018 Gm11663-201ENSMUST00000117888 290 ntBASIC14.05□□□□□ -0.16
Ctr9Q62018 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ctr9Q62018 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.05□□□□□ -0.16
Ctr9Q62018 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.05□□□□□ -0.16
Ctr9Q62018 Gm42599-201ENSMUST00000201308 469 ntBASIC14.05□□□□□ -0.16
Ctr9Q62018 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC14.05□□□□□ -0.16
Ctr9Q62018 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.05□□□□□ -0.16
Ctr9Q62018 AC153929.1-201ENSMUST00000219009 303 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms