Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ecm1Q61508 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ecm1Q61508 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ecm1Q61508 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ecm1Q61508 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ecm1Q61508 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ecm1Q61508 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.12□□□□□ -0.31
Ecm1Q61508 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.12□□□□□ -0.31
Ecm1Q61508 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ecm1Q61508 Gm12247-201ENSMUST00000117585 670 ntBASIC13.12□□□□□ -0.31
Ecm1Q61508 Gm11801-201ENSMUST00000117807 746 ntBASIC13.12□□□□□ -0.31
Ecm1Q61508 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ecm1Q61508 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.12□□□□□ -0.31
Ecm1Q61508 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.12□□□□□ -0.31
Ecm1Q61508 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.12□□□□□ -0.31
Ecm1Q61508 Gm18561-201ENSMUST00000206027 804 ntBASIC13.12□□□□□ -0.31
Ecm1Q61508 Gm18059-201ENSMUST00000208073 580 ntBASIC13.12□□□□□ -0.31
Ecm1Q61508 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ecm1Q61508 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.12□□□□□ -0.31
Ecm1Q61508 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.12□□□□□ -0.31
Ecm1Q61508 AC154176.1-201ENSMUST00000225897 220 ntBASIC13.12□□□□□ -0.31
Ecm1Q61508 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
Ecm1Q61508 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.12□□□□□ -0.31
Ecm1Q61508 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.12□□□□□ -0.31
Ecm1Q61508 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ecm1Q61508 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.12□□□□□ -0.31
Ecm1Q61508 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ecm1Q61508 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ecm1Q61508 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Ecm1Q61508 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ecm1Q61508 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ecm1Q61508 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ecm1Q61508 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.11□□□□□ -0.31
Ecm1Q61508 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC13.11□□□□□ -0.31
Ecm1Q61508 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.11□□□□□ -0.31
Ecm1Q61508 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ecm1Q61508 Gm9135-201ENSMUST00000182963 990 ntBASIC13.11□□□□□ -0.31
Ecm1Q61508 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.11□□□□□ -0.31
Ecm1Q61508 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.11□□□□□ -0.31
Ecm1Q61508 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC13.11□□□□□ -0.31
Ecm1Q61508 Gm42816-201ENSMUST00000198433 325 ntBASIC13.11□□□□□ -0.31
Ecm1Q61508 Gm3726-201ENSMUST00000203110 785 ntBASIC13.11□□□□□ -0.31
Ecm1Q61508 Gm17825-201ENSMUST00000206836 794 ntBASIC13.11□□□□□ -0.31
Ecm1Q61508 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.11□□□□□ -0.31
Ecm1Q61508 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.11□□□□□ -0.31
Ecm1Q61508 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ecm1Q61508 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Ecm1Q61508 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.11□□□□□ -0.31
Ecm1Q61508 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ecm1Q61508 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ecm1Q61508 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ecm1Q61508 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ecm1Q61508 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ecm1Q61508 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ecm1Q61508 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ecm1Q61508 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.1□□□□□ -0.31
Ecm1Q61508 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms