Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC15.43■□□□□ 0.06
Ccne1Q61457 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccne1Q61457 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccne1Q61457 Gm23105-201ENSMUST00000083719 134 ntBASIC15.43■□□□□ 0.06
Ccne1Q61457 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccne1Q61457 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccne1Q61457 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccne1Q61457 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccne1Q61457 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccne1Q61457 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccne1Q61457 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccne1Q61457 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccne1Q61457 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ccne1Q61457 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ccne1Q61457 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC15.43■□□□□ 0.06
Ccne1Q61457 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC15.43■□□□□ 0.06
Ccne1Q61457 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccne1Q61457 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccne1Q61457 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccne1Q61457 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ccne1Q61457 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccne1Q61457 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccne1Q61457 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccne1Q61457 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Ccne1Q61457 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
Ccne1Q61457 Gm11244-201ENSMUST00000121243 237 ntBASIC15.42■□□□□ 0.06
Ccne1Q61457 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccne1Q61457 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.42■□□□□ 0.06
Ccne1Q61457 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC15.42■□□□□ 0.06
Ccne1Q61457 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccne1Q61457 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccne1Q61457 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC15.42■□□□□ 0.06
Ccne1Q61457 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccne1Q61457 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccne1Q61457 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ccne1Q61457 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ccne1Q61457 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC15.42■□□□□ 0.06
Ccne1Q61457 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ccne1Q61457 Gm21358-201ENSMUST00000191645 1659 ntBASIC15.41■□□□□ 0.06
Ccne1Q61457 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
Ccne1Q61457 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ccne1Q61457 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Gm12628-201ENSMUST00000122193 382 ntBASIC15.41■□□□□ 0.06
Ccne1Q61457 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC15.41■□□□□ 0.06
Ccne1Q61457 Gm22442-201ENSMUST00000157256 144 ntBASIC15.41■□□□□ 0.06
Ccne1Q61457 Gm6114-201ENSMUST00000182472 968 ntBASIC15.41■□□□□ 0.06
Ccne1Q61457 Gm29410-201ENSMUST00000188383 694 ntBASIC15.41■□□□□ 0.06
Ccne1Q61457 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC15.41■□□□□ 0.06
Ccne1Q61457 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Ccne1Q61457 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 AC136376.2-201ENSMUST00000228819 490 ntBASIC15.41■□□□□ 0.06
Ccne1Q61457 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC15.41■□□□□ 0.06
Ccne1Q61457 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Ccne1Q61457 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Gm1840-201ENSMUST00000051687 1432 ntBASIC15.41■□□□□ 0.06
Ccne1Q61457 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ccne1Q61457 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
Ccne1Q61457 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccne1Q61457 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccne1Q61457 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccne1Q61457 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccne1Q61457 Cog3-203ENSMUST00000227473 4197 ntBASIC15.4■□□□□ 0.06
Ccne1Q61457 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ccne1Q61457 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ccne1Q61457 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccne1Q61457 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccne1Q61457 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Ccne1Q61457 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccne1Q61457 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Ccne1Q61457 Gm15615-201ENSMUST00000118876 198 ntBASIC15.4■□□□□ 0.06
Ccne1Q61457 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Ccne1Q61457 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccne1Q61457 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccne1Q61457 Gm6407-201ENSMUST00000176468 549 ntBASIC15.4■□□□□ 0.06
Ccne1Q61457 Mir6407-201ENSMUST00000184510 101 ntBASIC15.4■□□□□ 0.06
Ccne1Q61457 Mir8093-201ENSMUST00000185043 137 ntBASIC15.4■□□□□ 0.06
Ccne1Q61457 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccne1Q61457 CT009546.1-201ENSMUST00000222573 1120 ntBASIC15.4■□□□□ 0.06
Ccne1Q61457 AC134869.4-202ENSMUST00000224350 837 ntBASIC15.4■□□□□ 0.06
Ccne1Q61457 Gm23680-201ENSMUST00000083162 164 ntBASIC15.4■□□□□ 0.06
Ccne1Q61457 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccne1Q61457 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccne1Q61457 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC15.4■□□□□ 0.06
Ccne1Q61457 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccne1Q61457 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms