Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NfkbibQ60778 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NfkbibQ60778 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NfkbibQ60778 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.27□□□□□ -0.12
NfkbibQ60778 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NfkbibQ60778 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NfkbibQ60778 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NfkbibQ60778 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NfkbibQ60778 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NfkbibQ60778 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.27□□□□□ -0.13
NfkbibQ60778 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.27□□□□□ -0.13
NfkbibQ60778 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.27□□□□□ -0.13
NfkbibQ60778 Gm24844-201ENSMUST00000158679 127 ntBASIC14.27□□□□□ -0.13
NfkbibQ60778 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NfkbibQ60778 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
NfkbibQ60778 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
NfkbibQ60778 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC14.27□□□□□ -0.13
NfkbibQ60778 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
NfkbibQ60778 Gm10702-201ENSMUST00000098929 1268 ntBASIC14.27□□□□□ -0.13
NfkbibQ60778 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfkbibQ60778 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfkbibQ60778 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfkbibQ60778 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NfkbibQ60778 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfkbibQ60778 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.27□□□□□ -0.13
NfkbibQ60778 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfkbibQ60778 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Matn2-203ENSMUST00000226766 3252 ntBASIC14.26□□□□□ -0.13
NfkbibQ60778 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.26□□□□□ -0.13
NfkbibQ60778 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
NfkbibQ60778 Gm15352-201ENSMUST00000118696 270 ntBASIC14.26□□□□□ -0.13
NfkbibQ60778 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC14.26□□□□□ -0.13
NfkbibQ60778 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Gm3150-201ENSMUST00000166418 204 ntBASIC14.26□□□□□ -0.13
NfkbibQ60778 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.26□□□□□ -0.13
NfkbibQ60778 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.26□□□□□ -0.13
NfkbibQ60778 AC166344.1-201ENSMUST00000223745 674 ntBASIC14.26□□□□□ -0.13
NfkbibQ60778 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
NfkbibQ60778 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
NfkbibQ60778 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfkbibQ60778 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
NfkbibQ60778 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.25□□□□□ -0.13
NfkbibQ60778 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NfkbibQ60778 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.25□□□□□ -0.13
NfkbibQ60778 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.25□□□□□ -0.13
NfkbibQ60778 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.25□□□□□ -0.13
NfkbibQ60778 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NfkbibQ60778 Gm11956-201ENSMUST00000119525 512 ntBASIC14.25□□□□□ -0.13
NfkbibQ60778 Gm13328-201ENSMUST00000120816 1020 ntBASIC14.25□□□□□ -0.13
NfkbibQ60778 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC14.25□□□□□ -0.13
NfkbibQ60778 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC14.25□□□□□ -0.13
NfkbibQ60778 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.25□□□□□ -0.13
NfkbibQ60778 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 Gm4797-201ENSMUST00000219075 1283 ntBASIC14.25□□□□□ -0.13
NfkbibQ60778 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.25□□□□□ -0.13
NfkbibQ60778 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfkbibQ60778 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NfkbibQ60778 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NfkbibQ60778 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NfkbibQ60778 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NfkbibQ60778 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.24□□□□□ -0.13
NfkbibQ60778 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
NfkbibQ60778 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NfkbibQ60778 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NfkbibQ60778 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.24□□□□□ -0.13
NfkbibQ60778 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NfkbibQ60778 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NfkbibQ60778 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NfkbibQ60778 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NfkbibQ60778 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NfkbibQ60778 Gm11700-201ENSMUST00000119409 403 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms