Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ClpbQ60649 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ClpbQ60649 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ClpbQ60649 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
ClpbQ60649 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
ClpbQ60649 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
ClpbQ60649 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ClpbQ60649 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
ClpbQ60649 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ClpbQ60649 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
ClpbQ60649 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
ClpbQ60649 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.45□□□□□ -0.58
ClpbQ60649 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
ClpbQ60649 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
ClpbQ60649 Gm24990-201ENSMUST00000157406 323 ntBASIC11.45□□□□□ -0.58
ClpbQ60649 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.45□□□□□ -0.58
ClpbQ60649 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.45□□□□□ -0.58
ClpbQ60649 Gm26461-201ENSMUST00000175064 290 ntBASIC11.45□□□□□ -0.58
ClpbQ60649 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ClpbQ60649 Gm45224-201ENSMUST00000208203 414 ntBASIC11.45□□□□□ -0.58
ClpbQ60649 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.45□□□□□ -0.58
ClpbQ60649 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.45□□□□□ -0.58
ClpbQ60649 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.45□□□□□ -0.58
ClpbQ60649 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.45□□□□□ -0.58
ClpbQ60649 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
ClpbQ60649 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ClpbQ60649 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.45□□□□□ -0.58
ClpbQ60649 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
ClpbQ60649 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.45□□□□□ -0.58
ClpbQ60649 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
ClpbQ60649 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
ClpbQ60649 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
ClpbQ60649 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
ClpbQ60649 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.44□□□□□ -0.58
ClpbQ60649 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
ClpbQ60649 Gm11989-201ENSMUST00000117240 672 ntBASIC11.44□□□□□ -0.58
ClpbQ60649 Gm11439-201ENSMUST00000118598 409 ntBASIC11.44□□□□□ -0.58
ClpbQ60649 Gm11362-201ENSMUST00000118838 850 ntBASIC11.44□□□□□ -0.58
ClpbQ60649 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.44□□□□□ -0.58
ClpbQ60649 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
ClpbQ60649 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
ClpbQ60649 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Gm18827-201ENSMUST00000188341 790 ntBASIC11.44□□□□□ -0.58
ClpbQ60649 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.44□□□□□ -0.58
ClpbQ60649 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC11.44□□□□□ -0.58
ClpbQ60649 Gm43068-201ENSMUST00000201095 1273 ntBASIC11.44□□□□□ -0.58
ClpbQ60649 Gm17812-201ENSMUST00000204935 318 ntBASIC11.44□□□□□ -0.58
ClpbQ60649 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.44□□□□□ -0.58
ClpbQ60649 Gm45433-201ENSMUST00000209386 247 ntBASIC11.44□□□□□ -0.58
ClpbQ60649 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.44□□□□□ -0.58
ClpbQ60649 Gm19208-201ENSMUST00000213861 912 ntBASIC11.44□□□□□ -0.58
ClpbQ60649 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
ClpbQ60649 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
ClpbQ60649 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
ClpbQ60649 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.44□□□□□ -0.58
ClpbQ60649 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms