Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Ccdc88aQ5SNZ0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Ccdc88aQ5SNZ0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc88aQ5SNZ0 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc88aQ5SNZ0 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc88aQ5SNZ0 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc88aQ5SNZ0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc88aQ5SNZ0 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc88aQ5SNZ0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm11960-201ENSMUST00000122068 925 ntBASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm18367-201ENSMUST00000176139 600 ntBASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm43778-201ENSMUST00000199438 199 ntBASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm6450-201ENSMUST00000200896 574 ntBASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc88aQ5SNZ0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm17070-201ENSMUST00000170463 784 ntBASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm10807-201ENSMUST00000177134 795 ntBASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm42657-201ENSMUST00000201746 211 ntBASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 AC153962.2-201ENSMUST00000219417 550 ntBASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 AC134860.1-201ENSMUST00000224867 660 ntBASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm13022-201ENSMUST00000121181 285 ntBASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm22442-201ENSMUST00000157256 144 ntBASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc88aQ5SNZ0 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms